STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO49910.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86. (41 aa)    
Predicted Functional Partners:
EHO49911.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.628
EHO49912.1
Transcriptional regulator, PadR family; Psort location: Cytoplasmic, score: 8.96.
       0.628
EHO49913.1
Putative phage DNA packaging protein; KEGG: bmq:BMQ_3854 3.6e-08 CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.440
EHO49909.1
Isochorismatase family protein; KEGG: lca:LSEI_2755 6.9e-50 amidase; K05993 isochorismatase.
       0.409
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.