STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO49869.1Transcriptional regulator, MerR family; KEGG: vfi:VF_A0114 7.4e-09 methyltransferase K00599. (124 aa)    
Predicted Functional Partners:
EHO52065.1
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 4.0e-06 zntR; zinc-responsive transcriptional regulator K13638; Psort location: Cytoplasmic, score: 8.96.
  
     0.767
EHO49868.1
KEGG: lpj:JDM1_2507 2.1e-41 4-carboxymuconolactone decarboxylase (putative); K01607 4-carboxymuconolactone decarboxylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.767
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
 
 0.735
EHO49870.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.642
EHO51172.1
KEGG: lbr:LVIS_0990 1.4e-211 glutamine synthetase; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.626
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.613
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.592
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.592
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.592
EHO49867.1
NAD-dependent deacetylase family protein; KEGG: lrl:LC705_01360 5.3e-59 silent information regulator protein sir2; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 9.26.
 
     0.590
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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