STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO49878.1e1-E2 ATPase; KEGG: lpl:lp_0124 8.6e-297 pacL1; cation transporting P-type ATPase K01552; Psort location: CytoplasmicMembrane, score: 10.00. (907 aa)    
Predicted Functional Partners:
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.558
EHO49877.1
Hypothetical protein.
       0.556
atpH
ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
  0.545
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 
 0.501
EHO49876.1
Hypothetical protein.
       0.493
EHO49335.1
KEGG: bpm:BURPS1710b_A2486 2.7e-23 MgtC family protein K07507; Psort location: CytoplasmicMembrane, score: 9.46.
  
 
 0.489
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 
 0.487
EHO51117.1
Inorganic diphosphatase PpaC; KEGG: lbr:LVIS_0807 7.1e-112 putative manganese-dependent inorganic pyrophosphatase K01507; Psort location: Cytoplasmic, score: 9.97.
    
  0.480
EHO52486.1
TrkA protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.472
EHO48097.1
KEGG: lbr:LVIS_1280 5.0e-79 F0F1-type ATP synthase, gamma subunit; K02115 F-type H+-transporting ATPase subunit gamma; Psort location: Cytoplasmic, score: 9.12.
   
 
  0.451
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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