STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO49835.1Hypothetical protein. (39 aa)    
Predicted Functional Partners:
EHO49836.1
Hypothetical protein.
       0.773
potA
Putative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
       0.526
EHO49831.1
Periplasmic spermidine/putrescine-binding protein PotD; KEGG: apb:SAR116_2031 5.1e-38 extracellular solute-binding protein, family 1 K11073; Psort location: Periplasmic, score: 10.00.
       0.506
EHO49832.1
Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: lre:Lreu_1644 1.8e-81 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
       0.506
EHO49833.1
KEGG: apb:SAR116_1792 3.2e-36 ABC transporter, permease protein, putative K02054; Psort location: CytoplasmicMembrane, score: 10.00.
       0.506
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.