STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO48558.1Hypothetical protein; KEGG: lki:LKI_01225 4.4e-16 LexA repressor K09976; Psort location: CytoplasmicMembrane, score: 9.82. (74 aa)    
Predicted Functional Partners:
EHO48559.1
Hypothetical protein; KEGG: edi:EDI_310210 0.0099 DNA repair protein Rad-50; Psort location: Cytoplasmic, score: 8.96.
 
    0.791
recU
Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
     0.762
EHO50812.1
Hypothetical protein; KEGG: mpu:MYPU_1770 7.2e-24 cysS; cysteinyl-tRNA synthetase (cysteine--tRNA ligase) K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0374 family.
 
    0.756
EHO54380.1
Transcriptional regulator, Spx/MgsR family; KEGG: lbr:LVIS_2140 4.1e-36 arsenate reductase; K00537 arsenate reductase; Belongs to the ArsC family.
  
     0.747
EHO46199.1
Regulatory protein spx; KEGG: lbr:LVIS_2140 3.2e-52 arsenate reductase; K00537 arsenate reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the ArsC family.
  
     0.707
EHO48597.1
Hypothetical protein; KEGG: tps:THAPSDRAFT_24902 0.0077 hypothetical protein; K10601 E3 ubiquitin-protein ligase synoviolin; Belongs to the UPF0473 family.
  
     0.705
EHO48604.1
DHHA1 domain protein; KEGG: gct:GC56T3_0746 7.0e-73 3'(2'),5'-bisphosphate nucleotidase K06881; Psort location: Cytoplasmic, score: 8.96.
  
     0.700
EHO53302.1
CamS sex pheromone family protein.
  
     0.693
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
  
    0.690
EHO49483.1
Transcriptional regulator, Spx/MgsR family; KEGG: lbr:LVIS_2140 2.2e-37 arsenate reductase; K00537 arsenate reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the ArsC family.
  
     0.687
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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