STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO48280.1KEGG: apb:SAR116_0710 1.4e-90 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97. (338 aa)    
Predicted Functional Partners:
EHO48279.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.991
EHO48495.1
Hypothetical protein; KEGG: ooe:OEOE_1199 3.5e-08 LysM repeat-containing muramidase; K01185 lysozyme; Psort location: Extracellular, score: 9.64.
  
 
 0.970
EHO48276.1
KEGG: ava:Ava_3478 5.8e-62 septum site-determining protein MinD K03609; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.863
EHO48278.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.859
EHO48088.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: cco:CCC13826_0511 8.0e-33 histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase) K05837; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 
 0.858
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.837
EHO48277.1
Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
  
 0.829
EHO51184.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: efa:EF2857 1.9e-125 penicillin-binding protein 2B; K00687 penicillin-binding protein 2B.
 
 
 0.717
EHO48281.1
Protein FolC; KEGG: lbr:LVIS_1252 6.7e-116 folylpolyglutamate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase; Psort location: Cytoplasmic, score: 9.97.
       0.707
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.671
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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