STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO48247.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (387 aa)    
Predicted Functional Partners:
EHO50112.1
Hypothetical protein; KEGG: rbe:RBE_0498 0.00027 rimJ; ribosomal-protein-alanine acetyltransferase K03790.
  
     0.740
EHO53769.1
Hypothetical protein.
  
     0.733
EHO53209.1
Hypothetical protein.
  
     0.732
EHO48547.1
Hypothetical protein.
  
     0.712
EHO49595.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.710
EHO54240.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.688
EHO48906.1
Hypothetical protein.
  
     0.688
EHO52861.1
Hypothetical protein; KEGG: xtr:733528 0.0061 mbd4, med1; methyl-CpG binding domain protein 4; K10801 methyl-CpG-binding domain protein 4; Psort location: OuterMembrane, score: 9.52.
  
     0.680
EHO48120.1
Hypothetical protein.
  
     0.664
EHO54082.1
GDSL-like protein; KEGG: lbr:LVIS_1825 2.7e-05 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
     0.657
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.