STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO47956.1Transcriptional regulator, TetR family; KEGG: bha:BH3415 0.0052 NADH dehydrogenase; K03885 NADH dehydrogenase. (78 aa)    
Predicted Functional Partners:
EHO47957.1
Hypothetical protein.
      0.821
EHO53764.1
Transcriptional regulator, TetR family; KEGG: bha:BH3415 9.3e-05 NADH dehydrogenase; K03885 NADH dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
  
     0.756
EHO47954.1
YhgE/Pip domain protein; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.
 
    0.661
EHO47955.1
YhgE/Pip domain protein; Psort location: CytoplasmicMembrane, score: 9.82; overlaps another CDS with the same product name.
 
    0.563
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.491
EHO47958.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.485
EHO47959.1
Hypothetical protein.
       0.485
EHO47953.1
Cation diffusion facilitator family transporter; KEGG: wch:wcw_1106 7.9e-11 czcD; cation efflux transporter; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.459
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.