STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO47855.1Hypothetical protein; KEGG: bme:BMEII0787 1.0e-25 putative uroporphyrin-III C-methyltransferase; Psort location: Cytoplasmic, score: 8.96. (122 aa)    
Predicted Functional Partners:
EHO50461.1
KEGG: acl:ACL_1319 1.0e-48 uracil-DNA glycosylase superfamily protein; Psort location: Cytoplasmic, score: 8.96.
      0.716
EHO53600.1
Putative protease synthase and sporulation negative regulatory protein PAI 1; KEGG: btl:BALH_2906 1.0e-41 paiA; spermine/spermidine N-acetyltransferase.
      0.694
EHO47761.1
Hypothetical protein.
       0.514
rbsK-2
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily.
 
      0.491
EHO52175.1
KEGG: lbr:LVIS_1923 3.5e-46 3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
       0.454
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.