STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO47572.1Flavodoxin-like protein; KEGG: bsu:BSU05300 4.1e-29 ydeQ; putative NAD(P)H oxidoreductase. (242 aa)    
Predicted Functional Partners:
EHO47571.1
Hypothetical protein.
 
     0.891
EHO47570.1
Hypothetical protein; KEGG: cai:Caci_6683 0.0053 cellulose 1,4-beta-cellobiosidase.
       0.658
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.641
EHO52486.1
TrkA protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.588
EHO53738.1
Transporter, CPA2 family; KEGG: sun:SUN_2183 9.7e-14 cation-transporting P-tyep ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.515
EHO53718.1
Hypothetical protein; KEGG: sun:SUN_2183 0.0044 cation-transporting P-tyep ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.515
EHO49283.1
Na+/H+ antiporter; KEGG: sun:SUN_2183 4.7e-27 cation-transporting P-tyep ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.515
EHO47573.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.468
EHO47574.1
Mutacin ABC transporter, ATP-binding protein MutF family protein; KEGG: bao:BAMF_3227 1.2e-38 spaF; SpaF; Psort location: CytoplasmicMembrane, score: 9.82.
       0.468
EHO52445.1
KEGG: lcr:LCRIS_01634 5.7e-71 menA; prenyltransferase, UbiA family; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.425
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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