STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO47005.1Aminopeptidase; KEGG: lpl:lp_0601 4.5e-165 pepC1; cysteine aminopeptidase K01372; Psort location: Cytoplasmic, score: 9.26. (453 aa)    
Predicted Functional Partners:
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
      
 0.777
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
      
 0.685
EHO52183.1
Putative neprilysin; KEGG: lbr:LVIS_1891 9.3e-197 neutral endopeptidase; K07386 putative endopeptidase; Psort location: Cytoplasmic, score: 9.26.
  
   
 0.644
EHO50560.1
KEGG: lrh:LGG_00627 4.1e-52 NUDIX family hydrolase; K03426 NAD+ diphosphatase.
    
   0.644
rpmJ
Ribosomal protein L36; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL36 family.
      
 0.627
EHO47003.1
dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
       0.570
rpiA-2
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
       0.559
rplA
Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
     
 0.513
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
      
 0.497
EHO49171.1
Hypothetical protein.
      
 0.459
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.