Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHO45866.1 | mecA | HMPREF9104_03254 | HMPREF9104_03130 | Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.1e-250 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.765 |
| EHO47579.1 | mecA | HMPREF9104_03051 | HMPREF9104_03130 | KEGG: snc:HMPREF0837_11672 2.8e-179 clpE; ATP dependent protease K03697; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.805 |
| EHO50814.1 | EHO50894.1 | HMPREF9104_01789 | HMPREF9104_01750 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | CBS domain protein. | 0.568 |
| EHO50814.1 | mecA | HMPREF9104_01789 | HMPREF9104_03130 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.635 |
| EHO50864.1 | mecA | HMPREF9104_01773 | HMPREF9104_03130 | Negative regulator of genetic competence ClpC/MecB; KEGG: snc:HMPREF0837_11672 7.3e-252 clpE; ATP dependent protease K03697; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.805 |
| EHO50894.1 | EHO50814.1 | HMPREF9104_01750 | HMPREF9104_01789 | CBS domain protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.568 |
| EHO50894.1 | mecA | HMPREF9104_01750 | HMPREF9104_03130 | CBS domain protein. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.644 |
| EHO50950.1 | EHO52339.1 | HMPREF9104_01744 | HMPREF9104_01059 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.485 |
| EHO50950.1 | EHO52747.1 | HMPREF9104_01744 | HMPREF9104_00855 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.695 |
| EHO50950.1 | mecA | HMPREF9104_01744 | HMPREF9104_03130 | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.691 |
| EHO52339.1 | EHO50950.1 | HMPREF9104_01059 | HMPREF9104_01744 | Hypothetical protein; Involved in cell division and chromosome segregation. | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | 0.485 |
| EHO52339.1 | EHO52747.1 | HMPREF9104_01059 | HMPREF9104_00855 | Hypothetical protein; Involved in cell division and chromosome segregation. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.449 |
| EHO52339.1 | mecA | HMPREF9104_01059 | HMPREF9104_03130 | Hypothetical protein; Involved in cell division and chromosome segregation. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.632 |
| EHO52747.1 | EHO50950.1 | HMPREF9104_00855 | HMPREF9104_01744 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00. | 0.695 |
| EHO52747.1 | EHO52339.1 | HMPREF9104_00855 | HMPREF9104_01059 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.449 |
| EHO52747.1 | mecA | HMPREF9104_00855 | HMPREF9104_03130 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.714 |
| EHO53353.1 | mecA | HMPREF9104_00621 | HMPREF9104_03130 | Negative regulator of genetic competence ClpC/MecB; KEGG: saa:SAUSA300_0510 9.1e-238 clpC; endopeptidase K03696; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.805 |
| clpB | mecA | HMPREF9104_02708 | HMPREF9104_03130 | ATP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.805 |
| mecA | EHO45866.1 | HMPREF9104_03130 | HMPREF9104_03254 | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.1e-250 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82. | 0.765 |
| mecA | EHO47579.1 | HMPREF9104_03130 | HMPREF9104_03051 | Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | KEGG: snc:HMPREF0837_11672 2.8e-179 clpE; ATP dependent protease K03697; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family. | 0.805 |
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