STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO46651.1Hypothetical protein; KEGG: ljf:FI9785_762 2.7e-16 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.82. (63 aa)    
Predicted Functional Partners:
EHO46652.1
KEGG: ljf:FI9785_762 8.0e-120 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
     0.985
EHO49916.1
ABC transporter, ATP-binding protein; KEGG: llk:LLKF_0259 5.7e-142 ycfI; multidrug resistance ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.975
EHO46653.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_761 9.5e-172 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.863
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.689
EHO49551.1
Thiol reductant ABC exporter, CydD subunit; KEGG: llk:LLKF_0723 1.1e-140 cydC; cytochrome d ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.586
EHO49594.1
Putative low molecular weight protein-tyrosine-phosphatase PtpA; KEGG: lrf:LAR_0231 3.5e-39 phosphotyrosine protein phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.581
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.563
EHO48909.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bcz:BCZK0670 2.0e-116 ndh; NADH dehydrogenase K00356; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.556
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.551
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
   0.548
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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