STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO46160.1Hypothetical protein; KEGG: snc:HMPREF0837_11378 5.1e-15 ABC superfamily transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (217 aa)    
Predicted Functional Partners:
EHO50477.1
Transcriptional regulator, MarR family.
  
     0.500
EHO54592.1
Hypothetical protein; KEGG: mpe:MYPE6470 1.4e-10 parC; DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A; Psort location: OuterMembrane, score: 9.52.
  
     0.411
EHO46161.1
Ser/Thr phosphatase family protein; KEGG: lpl:lp_3251 3.5e-62 3',5'-cyclic-nucleotide phosphodiesterase K01120; Psort location: Cytoplasmic, score: 9.26.
       0.405
EHO46162.1
ABC transporter, ATP-binding protein; KEGG: bmq:BMQ_0460 1.9e-70 putative glycerol-3-phosphate ABC transporter, ATP-binding protein; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.405
EHO46163.1
ABC transporter, permease protein; KEGG: pmo:Pmob_0956 1.2e-43 monosaccharide-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.402
EHO46164.1
KEGG: scl:sce9265 1.7e-32 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
       0.402
EHO46165.1
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 1.2e-08 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027.
       0.402
Your Current Organism:
Lactobacillus kisonensis
NCBI taxonomy Id: 797516
Other names: L. kisonensis F0435, Lactobacillus kisonensis F0435, Lactobacillus kisonensis str. F0435, Lactobacillus kisonensis strain F0435, Lactobacillus sp. oral taxon 424 str. F0435
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