STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH38131.1Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (79 aa)    
Predicted Functional Partners:
AFH38498.1
PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup.
  
 
 0.872
AFH39894.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 
 0.789
AFH38195.1
PFAM: Cytochrome c.
      
 0.715
AFH38542.1
PFAM: Cytochrome c.
      
 0.715
AFH38133.1
Hypothetical protein.
       0.647
AFH38132.1
Hypothetical protein.
       0.606
AFH38134.1
PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc).
       0.590
AFH38136.1
PFAM: 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.450
AFH38135.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.438
AFH39490.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
     
 0.437
Your Current Organism:
Thermus thermophilus
NCBI taxonomy Id: 798128
Other names: T. thermophilus JL-18, Thermus thermophilus JL-18, Thermus thermophilus str. JL-18, Thermus thermophilus strain JL-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.