STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019695_00290Unannotated protein. (479 aa)    
Predicted Functional Partners:
GCA_002019695_01663
Unannotated protein.
   
  0.602
GCA_002019695_00359
Unannotated protein.
 
  
  0.591
GCA_002019695_00456
Unannotated protein.
 
  
  0.591
GCA_002019695_04940
Unannotated protein.
 
  
  0.591
GCA_002019695_02969
Unannotated protein.
  
     0.518
GCA_002019695_00291
Unannotated protein.
       0.462
GCA_002019695_02546
Unannotated protein.
 
      0.429
GCA_002019695_04354
Unannotated protein.
    
 0.416
Your Current Organism:
Bacillus clarkii
NCBI taxonomy Id: 79879
Other names: ATCC 700162, CIP 105301, DSM 8720, LMG 17947, LMG:17947, [. clarkii, [Bacillus] clarkii, strain PN-102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.