STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019695_01021Unannotated protein. (271 aa)    
Predicted Functional Partners:
GCA_002019695_00189
Unannotated protein.
  
 0.983
GCA_002019695_01084
Unannotated protein.
  
 
 0.853
GCA_002019695_01811
Unannotated protein.
    
 0.839
GCA_002019695_03264
Unannotated protein.
  
 
 0.838
GCA_002019695_00178
Unannotated protein.
  
 0.821
GCA_002019695_02707
Unannotated protein.
  
 
 0.802
GCA_002019695_00170
Unannotated protein.
  
 0.800
GCA_002019695_01579
Unannotated protein.
    
 0.752
GCA_002019695_01017
Unannotated protein.
 
  
 0.751
GCA_002019695_04409
Unannotated protein.
  
  
0.720
Your Current Organism:
Bacillus clarkii
NCBI taxonomy Id: 79879
Other names: ATCC 700162, CIP 105301, DSM 8720, LMG 17947, LMG:17947, [. clarkii, [Bacillus] clarkii, strain PN-102
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.