STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019695_01083Unannotated protein. (466 aa)    
Predicted Functional Partners:
GCA_002019695_04394
Unannotated protein.
  
  
 
0.801
GCA_002019695_04774
Unannotated protein.
   
 
 0.801
GCA_002019695_04922
Unannotated protein.
   
 
 0.801
GCA_002019695_02661
Unannotated protein.
 
 
 0.793
GCA_002019695_01702
Unannotated protein.
   
 
 0.783
GCA_002019695_01726
Unannotated protein.
   
 
 0.783
GCA_002019695_04600
Unannotated protein.
 
 0.765
GCA_002019695_02152
Unannotated protein.
   
 
 0.761
GCA_002019695_04268
Unannotated protein.
   
 
 0.761
GCA_002019695_04211
Unannotated protein.
 
  
 
0.724
Your Current Organism:
Bacillus clarkii
NCBI taxonomy Id: 79879
Other names: ATCC 700162, CIP 105301, DSM 8720, LMG 17947, LMG:17947, [. clarkii, [Bacillus] clarkii, strain PN-102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.