STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019695_01845Unannotated protein. (394 aa)    
Predicted Functional Partners:
GCA_002019695_01844
Unannotated protein.
 
   
 0.782
GCA_002019695_03675
Unannotated protein.
  
 
 0.690
GCA_002019695_00918
Unannotated protein.
    
   0.649
GCA_002019695_04848
Unannotated protein.
    
   0.649
GCA_002019695_02717
Unannotated protein.
  
  
 0.539
GCA_002019695_04596
Unannotated protein.
  
  
 0.514
GCA_002019695_00875
Unannotated protein.
  
  
 0.500
GCA_002019695_01857
Unannotated protein.
  
  
 0.500
GCA_002019695_01811
Unannotated protein.
     
 0.498
GCA_002019695_00397
Unannotated protein.
  
  
 0.480
Your Current Organism:
Bacillus clarkii
NCBI taxonomy Id: 79879
Other names: ATCC 700162, CIP 105301, DSM 8720, LMG 17947, LMG:17947, [. clarkii, [Bacillus] clarkii, strain PN-102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.