STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019695_02178Unannotated protein. (168 aa)    
Predicted Functional Partners:
GCA_002019695_02782
Unannotated protein.
   
   0.738
GCA_002019695_04377
Unannotated protein.
  
  
 0.722
GCA_002019695_04603
Unannotated protein.
  
  
 0.722
GCA_002019695_04440
Unannotated protein.
   
    0.635
GCA_002019695_02179
Unannotated protein.
  
    0.615
GCA_002019695_02264
Unannotated protein.
  
 
 0.594
GCA_002019695_00559
Unannotated protein.
   
 
 0.519
GCA_002019695_01243
Unannotated protein.
   
 
 0.519
GCA_002019695_00001
Unannotated protein.
  
  
 0.510
GCA_002019695_00808
Unannotated protein.
  
  
 0.503
Your Current Organism:
Bacillus clarkii
NCBI taxonomy Id: 79879
Other names: ATCC 700162, CIP 105301, DSM 8720, LMG 17947, LMG:17947, [. clarkii, [Bacillus] clarkii, strain PN-102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.