STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019695_04059Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_002019695_04058
Unannotated protein.
 0.999
GCA_002019695_04225
Unannotated protein.
 0.997
GCA_002019695_04813
Unannotated protein.
 0.997
GCA_002019695_00497
Unannotated protein.
  
 0.904
GCA_002019695_01882
Unannotated protein.
  
 
 0.776
GCA_002019695_04056
Unannotated protein.
 
    0.546
GCA_002019695_04817
Unannotated protein.
  
 
 0.527
GCA_002019695_04057
Unannotated protein.
 
  0.520
GCA_002019695_01266
Unannotated protein.
 
 
 0.448
GCA_002019695_04969
Unannotated protein.
 
 
 0.448
Your Current Organism:
Bacillus clarkii
NCBI taxonomy Id: 79879
Other names: ATCC 700162, CIP 105301, DSM 8720, LMG 17947, LMG:17947, [. clarkii, [Bacillus] clarkii, strain PN-102
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.