STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019695_04387Unannotated protein. (145 aa)    
Predicted Functional Partners:
GCA_002019695_03634
Unannotated protein.
  
 0.977
GCA_002019695_03714
Unannotated protein.
  
 0.977
GCA_002019695_04666
Unannotated protein.
  
 0.977
GCA_002019695_00942
Unannotated protein.
   
 0.965
GCA_002019695_03612
Unannotated protein.
    
 0.962
GCA_002019695_00907
Unannotated protein.
   
 0.950
GCA_002019695_00930
Unannotated protein.
   
  0.950
GCA_002019695_01449
Unannotated protein.
    
 0.950
GCA_002019695_00939
Unannotated protein.
   
 0.937
GCA_002019695_01320
Unannotated protein.
   
  0.927
Your Current Organism:
Bacillus clarkii
NCBI taxonomy Id: 79879
Other names: ATCC 700162, CIP 105301, DSM 8720, LMG 17947, LMG:17947, [. clarkii, [Bacillus] clarkii, strain PN-102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.