STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002019665_01251Unannotated protein. (87 aa)    
Predicted Functional Partners:
GCA_002019665_01252
Unannotated protein.
       0.520
GCA_002019665_01253
Unannotated protein.
       0.455
GCA_002019665_01254
Unannotated protein.
       0.449
GCA_002019665_01255
Unannotated protein.
       0.449
GCA_002019665_01250
Unannotated protein.
       0.406
Your Current Organism:
Bacillus halmapalus
NCBI taxonomy Id: 79882
Other names: ATCC 700165, B. halmapalus, CIP 105303, DSM 8723, JCM 12302, LMG 17950, LMG:17950, strain PN-118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.