STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FZC76_22465Unannotated protein. (209 aa)    
Predicted Functional Partners:
sigW
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.995
GCA_001636495_03374
Unannotated protein.
 
 
 0.804
FZC76_08715
Unannotated protein.
  
     0.772
GCA_001636495_03375
Unannotated protein.
 
 
 0.721
sigY
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.706
GCA_001636495_01582
Unannotated protein.
 
 
 0.706
GCA_001636495_03403
Unannotated protein.
 
 
 0.704
FZC76_15890
Unannotated protein.
 
     0.701
GCA_001636495_02149
Unannotated protein.
 
 
 0.701
prsW
Unannotated protein; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.
 
   
 0.684
Your Current Organism:
Bacillus horikoshii
NCBI taxonomy Id: 79883
Other names: ATCC 700161, B. horikoshii, CIP 105300, DSM 8719, LMG 17946, LMG:17946, strain PN-121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.