Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FZC76_01885 | carA-2 | GCA_001636495_03091 | GCA_001636495_03088 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.875 |
FZC76_01885 | carB | GCA_001636495_03091 | GCA_001636495_02758 | Unannotated protein. | Unannotated protein. | 0.766 |
FZC76_01885 | carB-2 | GCA_001636495_03091 | GCA_001636495_03087 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.886 |
FZC76_01885 | pyrB | GCA_001636495_03091 | GCA_001636495_03090 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.977 |
FZC76_01885 | pyrC | GCA_001636495_03091 | GCA_001636495_03089 | Unannotated protein. | Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.948 |
FZC76_01885 | pyrD | GCA_001636495_03091 | GCA_001636495_03085 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.919 |
FZC76_01885 | pyrE | GCA_001636495_03091 | GCA_001636495_03083 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.920 |
FZC76_01885 | pyrF | GCA_001636495_03091 | GCA_001636495_03084 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.919 |
FZC76_01885 | pyrK | GCA_001636495_03091 | GCA_001636495_03086 | Unannotated protein. | Unannotated protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.891 |
FZC76_08040 | pyrB | GCA_001636495_01852 | GCA_001636495_03090 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.408 |
FZC76_08040 | pyrD | GCA_001636495_01852 | GCA_001636495_03085 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.970 |
FZC76_08040 | pyrK | GCA_001636495_01852 | GCA_001636495_03086 | Unannotated protein. | Unannotated protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.984 |
carA-2 | FZC76_01885 | GCA_001636495_03088 | GCA_001636495_03091 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.875 |
carA-2 | carB | GCA_001636495_03088 | GCA_001636495_02758 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.998 |
carA-2 | carB-2 | GCA_001636495_03088 | GCA_001636495_03087 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Belongs to the CarB family. | 0.999 |
carA-2 | pyrB | GCA_001636495_03088 | GCA_001636495_03090 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.998 |
carA-2 | pyrC | GCA_001636495_03088 | GCA_001636495_03089 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.996 |
carA-2 | pyrD | GCA_001636495_03088 | GCA_001636495_03085 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.964 |
carA-2 | pyrE | GCA_001636495_03088 | GCA_001636495_03083 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.951 |
carA-2 | pyrF | GCA_001636495_03088 | GCA_001636495_03084 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.952 |
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