STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636495_03565Unannotated protein. (225 aa)    
Predicted Functional Partners:
flgL
Unannotated protein.
 
 
 0.841
FZC76_17725
Unannotated protein.
       0.816
fliY
Unannotated protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
  
 0.796
FZC76_05480
Unannotated protein.
 
 
 0.783
GCA_001636495_01096
Unannotated protein.
  
  
 0.779
FZC76_05475
Unannotated protein.
 
 
 0.753
fliI
Unannotated protein.
 
  
 0.747
fliF
Unannotated protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
    0.709
fliE
Unannotated protein.
  
  
 0.699
motB
Unannotated protein.
 
  
 0.653
Your Current Organism:
Bacillus horikoshii
NCBI taxonomy Id: 79883
Other names: ATCC 700161, B. horikoshii, CIP 105300, DSM 8719, LMG 17946, LMG:17946, strain PN-121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.