Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FZC76_09200 | FZC76_11240 | GCA_001636495_01553 | GCA_001636495_02373 | Unannotated protein. | Unannotated protein. | 0.655 |
FZC76_09200 | FZC76_16990 | GCA_001636495_01553 | GCA_001636495_03701 | Unannotated protein. | Unannotated protein. | 0.543 |
FZC76_09200 | GCA_001636495_02520 | GCA_001636495_01553 | GCA_001636495_02520 | Unannotated protein. | Unannotated protein. | 0.403 |
FZC76_09200 | rpoA | GCA_001636495_01553 | GCA_001636495_00445 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.410 |
FZC76_11240 | FZC76_09200 | GCA_001636495_02373 | GCA_001636495_01553 | Unannotated protein. | Unannotated protein. | 0.655 |
FZC76_11240 | FZC76_16990 | GCA_001636495_02373 | GCA_001636495_03701 | Unannotated protein. | Unannotated protein. | 0.491 |
FZC76_11240 | GCA_001636495_00677 | GCA_001636495_02373 | GCA_001636495_00677 | Unannotated protein. | Unannotated protein. | 0.436 |
FZC76_11240 | GCA_001636495_02520 | GCA_001636495_02373 | GCA_001636495_02520 | Unannotated protein. | Unannotated protein. | 0.586 |
FZC76_11240 | grpE | GCA_001636495_02373 | GCA_001636495_01915 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.488 |
FZC76_11240 | rpoA | GCA_001636495_02373 | GCA_001636495_00445 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.878 |
FZC76_11240 | rpoB | GCA_001636495_02373 | GCA_001636495_00480 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.865 |
FZC76_11240 | rpoC | GCA_001636495_02373 | GCA_001636495_00479 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.419 |
FZC76_11240 | rpoZ | GCA_001636495_02373 | GCA_001636495_03073 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.845 |
FZC76_14860 | FZC76_16990 | GCA_001636495_00118 | GCA_001636495_03701 | Unannotated protein. | Unannotated protein. | 0.582 |
FZC76_16990 | FZC76_09200 | GCA_001636495_03701 | GCA_001636495_01553 | Unannotated protein. | Unannotated protein. | 0.543 |
FZC76_16990 | FZC76_11240 | GCA_001636495_03701 | GCA_001636495_02373 | Unannotated protein. | Unannotated protein. | 0.491 |
FZC76_16990 | FZC76_14860 | GCA_001636495_03701 | GCA_001636495_00118 | Unannotated protein. | Unannotated protein. | 0.582 |
FZC76_16990 | GCA_001636495_00677 | GCA_001636495_03701 | GCA_001636495_00677 | Unannotated protein. | Unannotated protein. | 0.699 |
FZC76_16990 | GCA_001636495_02520 | GCA_001636495_03701 | GCA_001636495_02520 | Unannotated protein. | Unannotated protein. | 0.491 |
FZC76_16990 | grpE | GCA_001636495_03701 | GCA_001636495_01915 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.558 |
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