Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FZC76_18725 | FZC76_18760 | GCA_001636495_03756 | GCA_001636495_03749 | Unannotated protein. | Unannotated protein. | 0.567 |
FZC76_18725 | GCA_001636495_03747 | GCA_001636495_03756 | GCA_001636495_03747 | Unannotated protein. | Unannotated protein. | 0.420 |
FZC76_18725 | tenA | GCA_001636495_03756 | GCA_001636495_00007 | Unannotated protein. | Unannotated protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family. | 0.502 |
FZC76_18725 | tenA-2 | GCA_001636495_03756 | GCA_001636495_03757 | Unannotated protein. | Unannotated protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.873 |
FZC76_18725 | tenI | GCA_001636495_03756 | GCA_001636495_03753 | Unannotated protein. | Unannotated protein. | 0.515 |
FZC76_18725 | thiD | GCA_001636495_03756 | GCA_001636495_03748 | Unannotated protein. | Unannotated protein. | 0.565 |
FZC76_18725 | thiG | GCA_001636495_03756 | GCA_001636495_03750 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.578 |
FZC76_18725 | thiS | GCA_001636495_03756 | GCA_001636495_03751 | Unannotated protein. | Unannotated protein. | 0.577 |
FZC76_18760 | FZC76_18725 | GCA_001636495_03749 | GCA_001636495_03756 | Unannotated protein. | Unannotated protein. | 0.567 |
FZC76_18760 | GCA_001636495_03747 | GCA_001636495_03749 | GCA_001636495_03747 | Unannotated protein. | Unannotated protein. | 0.929 |
FZC76_18760 | tenA | GCA_001636495_03749 | GCA_001636495_00007 | Unannotated protein. | Unannotated protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family. | 0.614 |
FZC76_18760 | tenA-2 | GCA_001636495_03749 | GCA_001636495_03757 | Unannotated protein. | Unannotated protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.614 |
FZC76_18760 | tenI | GCA_001636495_03749 | GCA_001636495_03753 | Unannotated protein. | Unannotated protein. | 0.945 |
FZC76_18760 | thiD | GCA_001636495_03749 | GCA_001636495_03748 | Unannotated protein. | Unannotated protein. | 0.953 |
FZC76_18760 | thiG | GCA_001636495_03749 | GCA_001636495_03750 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.984 |
FZC76_18760 | thiO | GCA_001636495_03749 | GCA_001636495_03752 | Unannotated protein. | Unannotated protein. | 0.938 |
FZC76_18760 | thiS | GCA_001636495_03749 | GCA_001636495_03751 | Unannotated protein. | Unannotated protein. | 0.993 |
FZC76_18760 | tilS | GCA_001636495_03749 | GCA_001636495_00522 | Unannotated protein. | Unannotated protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.655 |
GCA_001636495_03747 | FZC76_18725 | GCA_001636495_03747 | GCA_001636495_03756 | Unannotated protein. | Unannotated protein. | 0.420 |
GCA_001636495_03747 | FZC76_18760 | GCA_001636495_03747 | GCA_001636495_03749 | Unannotated protein. | Unannotated protein. | 0.929 |
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