Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMK78050.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)    
Predicted Functional Partners:
KMK78205.1
Aryl-alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.926
KMK77572.1
Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.905
KMK75009.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.897
KMK76700.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.888
KMK77573.1
Pyruvate formate lyase-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.856
eutD
Phosphotransacetylase; In Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.813
KMK75908.1
Phosphatidylserine decarboxylase; Catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.757
KMK77832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.741
KMK76992.1
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.741
KMK75512.1
2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.741
Your Current Organism:
Bacillus pseudalcaliphilus
NCBI taxonomy Id: 79884
Other names: ATCC 700166, B. pseudalcaliphilus, Bacillus pseudalcalophilus, CIP 105304, DSM 8725, LMG 17951, LMG:17951, strain PN-137
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