STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK78283.1Stage II sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
KMK76450.1
Stage IV sporulation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.826
KMK74919.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.778
KMK74497.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.731
KMK74807.1
Stage II sporulation protein P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.679
KMK77027.1
Stage II sporulation protein P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.656
KMK77004.1
Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.632
KMK76113.1
Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
KMK75772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
KMK77114.1
Stage V sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.567
KMK75954.1
Stage IV sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.567
Your Current Organism:
Bacillus pseudalcaliphilus
NCBI taxonomy Id: 79884
Other names: ATCC 700166, B. pseudalcaliphilus, Bacillus pseudalcalophilus, CIP 105304, DSM 8725, LMG 17951, LMG:17951, strain PN-137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.