STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK77209.1ATP-dependent protease subunit HslV; Heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
KMK77210.1
Clp protease ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KMK77208.1
Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.880
groEL
Molecular chaperone GroEL; 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; Derived by autom [...]
   
 
 0.865
KMK75940.1
Protein GrpE; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.852
KMK74631.1
ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.838
KMK74383.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.828
KMK74633.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.777
KMK75602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.766
KMK75356.1
Chaperone protein HtpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.766
KMK77479.1
Clp protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.753
Your Current Organism:
Bacillus pseudalcaliphilus
NCBI taxonomy Id: 79884
Other names: ATCC 700166, B. pseudalcaliphilus, Bacillus pseudalcalophilus, CIP 105304, DSM 8725, LMG 17951, LMG:17951, strain PN-137
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