Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KMK76950.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)    
Predicted Functional Partners:
KMK76841.1
ATP synthase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.908
KMK77024.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.732
KMK77710.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.710
KMK76637.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.710
KMK75817.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.710
KMK75928.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.710
KMK76192.1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.629
KMK76445.1
Aromatic acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.616
fusA
Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.586
KMK77083.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.585
Your Current Organism:
Bacillus pseudalcaliphilus
NCBI taxonomy Id: 79884
Other names: ATCC 700166, B. pseudalcaliphilus, Bacillus pseudalcalophilus, CIP 105304, DSM 8725, LMG 17951, LMG:17951, strain PN-137
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