STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK76245.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)    
Predicted Functional Partners:
KMK77083.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
KMK77081.1
Heme A synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.773
KMK75063.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.741
KMK77048.1
Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.724
KMK77084.1
Quinol oxidase subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.714
KMK75967.1
Cytochrome C551; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.686
KMK76421.1
Cytochrome Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.670
KMK77085.1
Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.657
KMK77449.1
Cytochrome C551; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.648
KMK77087.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.640
Your Current Organism:
Bacillus pseudalcaliphilus
NCBI taxonomy Id: 79884
Other names: ATCC 700166, B. pseudalcaliphilus, Bacillus pseudalcalophilus, CIP 105304, DSM 8725, LMG 17951, LMG:17951, strain PN-137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.