Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMK74529.1Thiamine biosynthesis protein ThiI; Required for the synthesis of the thiazole moiety; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)    
Predicted Functional Partners:
KMK74528.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
KMK75739.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
KMK75706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.950
KMK75996.1
Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.888
KMK75740.1
Thiouridylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.866
KMK76010.1
Thiazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.834
KMK77158.1
16S rRNA methyltransferase; Catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.791
KMK76008.1
Thiamine-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.786
KMK77984.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.721
KMK76305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.721
Your Current Organism:
Bacillus pseudalcaliphilus
NCBI taxonomy Id: 79884
Other names: ATCC 700166, B. pseudalcaliphilus, Bacillus pseudalcalophilus, CIP 105304, DSM 8725, LMG 17951, LMG:17951, strain PN-137
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