Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMK74487.150S ribosomal protein L25; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
KMK77260.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
KMK74708.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
KMK77910.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.991
KMK74897.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.991
KMK77912.1
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.990
KMK77833.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.989
KMK77189.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.989
KMK74891.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.989
rpsP
30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.988
KMK75933.1
30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.988
Your Current Organism:
Bacillus pseudalcaliphilus
NCBI taxonomy Id: 79884
Other names: ATCC 700166, B. pseudalcaliphilus, Bacillus pseudalcalophilus, CIP 105304, DSM 8725, LMG 17951, LMG:17951, strain PN-137
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.