STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Api5Apoptosis inhibitor 5. (612 aa)    
Predicted Functional Partners:
Polr2b
DNA-directed RNA polymerase II subunit RPB2.
   
    0.869
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.869
Lbr
Lamin-B receptor.
      
 0.534
TBC1D23
TBC1 domain family member 23.
   
   0.514
FANCM
Fanconi anemia group M protein.
      
 0.503
CSKR_5893s
RRM domain-containing protein.
   
 
 0.448
Elavl1
ELAV like protein 2/3/4.
   
  
 0.413
PDCD4
Programmed cell death protein 4.
      
 0.410
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.