CSKR_8906s protein (Clonorchis sinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CSKR_8906s

Uncharacterized protein. (262 aa)

Predicted Functional Partners:

GTF3C3

0.871

BDP1

0.766

Brf1

0.739

POLR3C

0.647

POLR3A

0.621

TBP

0.601

RpII18

0.586

POLR3F

0.577

POLR3E

0.573

Polr1c

0.566

Your Current Organism:

Clonorchis sinensis

NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP1	Brf1	A0A419Q3K6	A0A419PG12	Transcription factor TFIIIB component B''-like protein.	Transcription factor IIIB 90 kDa subunit.	0.995
BDP1	CSKR_8906s	A0A419Q3K6	A0A3R7BZ57	Transcription factor TFIIIB component B''-like protein.	Uncharacterized protein.	0.766
BDP1	GTF3C3	A0A419Q3K6	A0A419PL28	Transcription factor TFIIIB component B''-like protein.	General transcription factor 3C polypeptide 3.	0.971
BDP1	POLR3A	A0A419Q3K6	A0A3R7D657	Transcription factor TFIIIB component B''-like protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.985
BDP1	POLR3C	A0A419Q3K6	A0A3R7CWY1	Transcription factor TFIIIB component B''-like protein.	DNA-directed RNA polymerase III subunit RPC3.	0.966
BDP1	POLR3E	A0A419Q3K6	A0A3R7H4X8	Transcription factor TFIIIB component B''-like protein.	DNA-directed RNA polymerase III subunit RPC5.	0.984
BDP1	POLR3F	A0A419Q3K6	A0A419QFW0	Transcription factor TFIIIB component B''-like protein.	DNA-directed RNA polymerase III subunit RPC6.	0.987
BDP1	Polr1c	A0A419Q3K6	A0A419PD76	Transcription factor TFIIIB component B''-like protein.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.939
BDP1	RpII18	A0A419Q3K6	H2KU25	Transcription factor TFIIIB component B''-like protein.	DNA-directed RNA polymerases I II and III subunit RPABC2.	0.923
BDP1	TBP	A0A419Q3K6	A0A3R7CKS1	Transcription factor TFIIIB component B''-like protein.	TATA-box-binding protein.	0.995
Brf1	BDP1	A0A419PG12	A0A419Q3K6	Transcription factor IIIB 90 kDa subunit.	Transcription factor TFIIIB component B''-like protein.	0.995
Brf1	CSKR_8906s	A0A419PG12	A0A3R7BZ57	Transcription factor IIIB 90 kDa subunit.	Uncharacterized protein.	0.739
Brf1	GTF3C3	A0A419PG12	A0A419PL28	Transcription factor IIIB 90 kDa subunit.	General transcription factor 3C polypeptide 3.	0.991
Brf1	POLR3A	A0A419PG12	A0A3R7D657	Transcription factor IIIB 90 kDa subunit.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.984
Brf1	POLR3C	A0A419PG12	A0A3R7CWY1	Transcription factor IIIB 90 kDa subunit.	DNA-directed RNA polymerase III subunit RPC3.	0.965
Brf1	POLR3E	A0A419PG12	A0A3R7H4X8	Transcription factor IIIB 90 kDa subunit.	DNA-directed RNA polymerase III subunit RPC5.	0.950
Brf1	POLR3F	A0A419PG12	A0A419QFW0	Transcription factor IIIB 90 kDa subunit.	DNA-directed RNA polymerase III subunit RPC6.	0.989
Brf1	Polr1c	A0A419PG12	A0A419PD76	Transcription factor IIIB 90 kDa subunit.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.969
Brf1	RpII18	A0A419PG12	H2KU25	Transcription factor IIIB 90 kDa subunit.	DNA-directed RNA polymerases I II and III subunit RPABC2.	0.923
Brf1	TBP	A0A419PG12	A0A3R7CKS1	Transcription factor IIIB 90 kDa subunit.	TATA-box-binding protein.	0.998