STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_5463sReverse transcriptase domain-containing protein. (1157 aa)    
Predicted Functional Partners:
Cyb5r4
Cytochrome b5 reductase 4.
  
 0.767
Oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.681
Fdx1
Adrenodoxin.
   
 0.674
fdx1l
Adrenodoxin-like protein mitochondrial.
   
 0.674
beg
Putative malonyl-CoA-acyl carrier protein transacylase.
  
0.670
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.664
Eci2
Enoyl-CoA delta isomerase 2.
   
 0.632
CSKR_2308s
PHB domain-containing protein.
  
 0.603
Ndufs8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8.
    
 0.601
Mylk3
Myosin light chain kinase 3.
    
 0.590
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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