STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gly-5Polypeptide N-acetylgalactosaminyltransferase. (540 aa)    
Predicted Functional Partners:
C38H2.2
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.710
C38H2.2-6
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.658
C38H2.2-7
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.658
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.658
Gcnt2
N-acetyllactosaminide beta-1.
     
 0.642
gcnt4-2
Beta-1.
     
 0.642
Gcnt2-2
N-acetyllactosaminide beta-1.
     
 0.642
GALNT16
Polypeptide N-acetylgalactosaminyltransferase 16.
  
  
 
0.513
dctn6
Dynactin subunit 6.
 
   
  0.483
BicD
Protein bicaudal D.
   
 
  0.479
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.