STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trx1Thioredoxin-1. (174 aa)    
Predicted Functional Partners:
CSKR_1975s
Putative sulfite oxidase.
    
 0.938
TXNRD1
Thioredoxin reductase 1.
  
 0.867
PRx3
Peroxiredoxin (Alkyl hydroperoxide reductase subunit C).
  
 0.864
Jafrac1
Peroxiredoxin (Alkyl hydroperoxide reductase subunit C).
  
 0.862
CLF_110816
Thioredoxin peroxidase.
  
 0.850
CSKR_8733s
Arrestin_C domain-containing protein.
    
 0.843
TXN2
Thioredoxin 1.
  
0.830
MAP3K15
Mitogen-activated protein kinase kinase kinase 15.
    
 0.819
CSKR_10305s
Thioredoxin peroxidase.
  
 0.803
ube2i
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.775
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.