STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snai2Zinc finger protein SNAI2. (643 aa)    
Predicted Functional Partners:
KDM1A
Lysine-specific histone demethylase 1A.
    
 0.751
CtBP
C-terminal-binding protein.
    
 
 0.676
KPNB1
Importin subunit beta-1.
    
   0.661
Gsk3b
Glycogen synthase kinase-3 beta.
   
 
 0.555
Gsk3b-2
Glycogen synthase kinase-3 beta.
   
 
 0.555
Twist2
Twist-related protein 2.
   
  
 0.554
Akt1
RAC serine/threonine-protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.552
CoRest
REST corepressor.
    
 0.548
Rcor3
REST corepressor 3.
    
 0.548
hmg20a
High mobility group protein 20A.
    
 
 0.541
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.