STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_4375sEGF-like domain-containing protein. (1588 aa)    
Predicted Functional Partners:
Cyb5r4
Cytochrome b5 reductase 4.
    
 0.701
NRXN1
Neurexin-1.
    
 0.648
NRXN1-2
Neurexin-1.
    
 0.648
Cask
Peripheral plasma membrane protein CASK.
    
 0.648
NRXN3
Neurexin-3.
    
 0.648
UTP20
Small subunit processome component 20-like protein.
   
  0.610
NOP58
Nucleolar protein 58.
    
  0.607
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.595
DCAF13
DDB1-and CUL4-associated factor 13.
    
  0.591
FCF1
rRNA-processing protein FCF1-like protein.
    
  0.591
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.