STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cers1Ceramide synthase 1. (462 aa)    
Predicted Functional Partners:
SPHK1
Sphingosine kinase 1.
     
 0.924
ASAH2
Neutral ceramidase.
     
 0.923
wun
Putative phosphatidate phosphatase.
    
 0.921
cgt-3
Ceramide glucosyltransferase 3.
     
 0.916
Gba2
Non-lysosomal glucosylceramidase.
     
 0.902
T27F6.6
Putative neutral sphingomyelinase.
     
 0.901
KDSR
3-ketodihydrosphingosine reductase.
     
 0.899
Cerk
Ceramide kinase.
     
 0.898
Plpp1
Phospholipid phosphatase 1.
    
 0.828
Plpp1-2
Phospholipid phosphatase 1.
    
 0.828
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.