STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RENRenin; Belongs to the peptidase A1 family. (381 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.612
ctsd-3
Cathepsin D; Belongs to the peptidase A1 family.
  
   
 0.551
PGA
Pepsin A; Belongs to the peptidase A1 family.
  
     0.526
CSKR_4918s
Pepsin-2B; Belongs to the peptidase A1 family.
  
     0.517
CSKR_11410s
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
  
     0.516
CSKR_1294s
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
  
     0.500
PGA-3
Pepsin A-4; Belongs to the peptidase A1 family.
  
     0.500
PGA-2
Pepsin A; Belongs to the peptidase A1 family.
  
     0.497
PGA-4
Pepsin A; Belongs to the peptidase A1 family.
  
     0.479
CSKR_11909s
Pepsin A-2/A-3; Belongs to the peptidase A1 family.
  
     0.461
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.