STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_7188sUncharacterized protein. (661 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.799
CSKR_5509s
Uncharacterized protein.
    
 0.718
Eci2
Enoyl-CoA delta isomerase 2.
    
  0.676
AP2M1
AP-2 complex subunit mu.
    
  0.661
ap2m1
AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
  0.661
AP2B1
AP complex subunit beta.
    
  0.653
MIMI_L669
Collagen-like protein 7.
   
 0.639
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.633
CSKR_997s
AP-2 complex subunit alpha.
    
  0.629
Ap2a2
AP-2 complex subunit alpha-2.
    
  0.629
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.