STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_2034sExoskeleton protein RP43. (240 aa)    
Predicted Functional Partners:
plxna4
Plexin-A4.
    
 0.627
CUBN-3
Cubilin.
  
 
  0.569
TLL1
Tolloid-like protein 1.
  
 
  0.536
tll2-3
Tolloid-like protein 2.
  
 
  0.532
Tbx3
T-box transcription factor TBX3.
   
 0.488
TBX2
T-box transcription factor TBX2.
   
 0.488
TBR1
T-box brain protein 1.
    
 0.487
Sema5b
Semaphorin-5B.
    
 0.474
CSKR_674s
Sperm acrosomal protein FSA-ACR.1.
    
 0.474
CSKR_9516s
Uncharacterized protein.
    
 0.474
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.