STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENDOVEndonuclease V. (238 aa)    
Predicted Functional Partners:
PPOX
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.916
Uros
Uroporphyrinogen-III synthase.
  
 
 0.867
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.810
CSKR_11683s
Uncharacterized protein.
  
 0.784
Hmbs
Hydroxymethylbilane synthase.
  
 0.784
Coprox
Oxygen-dependent coproporphyrinogen-III oxidase.
  
 0.758
Coprox-2
Oxygen-dependent coproporphyrinogen-III oxidase.
  
 0.758
glt1
Putative glutamate synthase [NADPH].
    
 0.707
cysA
Cystathionine gamma-lyase.
    
  0.615
CNX2
Cyclic pyranopterin monophosphate synthase.
    
  0.593
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.