STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc-7Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (447 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2.
    
  0.574
CSKR_4840s
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
   0.497
drg1
Developmentally-regulated GTP-binding protein 1.
    
   0.493
CSKR_14204s
Uncharacterized protein.
    
   0.480
CSKR_8638s
UPF0428 protein CXorf56-like protein.
    
   0.480
POLE2
DNA polymerase epsilon subunit 2.
    
   0.480
SLC25A1
Tricarboxylate transport protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.480
CSKR_5539s
Citrate synthase; Belongs to the citrate synthase family.
    
   0.480
CSKR_14088s
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.447
CSKR_7391s
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.447
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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