STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_5017sRunt domain-containing protein. (535 aa)    
Predicted Functional Partners:
ETS-2
Protein C-ets-2.
   
 0.884
med27-b
Mediator of RNA polymerase II transcription subunit 27-B.
    
 0.731
foxp1b
Forkhead box protein P1-B.
    
 0.725
gata3
Transcription factor GATA-3.
    
 0.721
Gata2
Endothelial transcription factor GATA-2.
    
 0.721
CSKR_10882s
Uncharacterized protein.
    
 0.720
YAP1
Transcriptional coactivator YAP1.
    
 0.720
fev
Protein FEV.
   
 0.719
ERG
Transcriptional regulator ERG-like protein.
   
 0.719
hdac3
Histone deacetylase 3.
    
 0.719
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.