STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_6219sUncharacterized protein. (970 aa)    
Predicted Functional Partners:
Smc1a
Structural maintenance of chromosomes protein.
   
 0.953
smc3
Structural maintenance of chromosomes protein 3.
   
 0.947
Stag2
Cohesin subunit SA-2.
   
 0.946
pds5b-a
Sister chromatid cohesion protein PDS5-like protein B-A.
   
 0.943
ESCO1
N-acetyltransferase ESCO1.
   
 0.854
ESPL1
Separin.
   
 0.854
smc4
Structural maintenance of chromosomes protein 4.
   
 0.848
WAPL
Wings apart-like-like protein.
    
 0.843
smc2
Structural maintenance of chromosomes protein 2.
   
 0.838
CSKR_13538s
Uncharacterized protein.
   
 0.800
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.